Datasetranked_basal_vs_classical
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetINTEGRIN FAMILY CELL SURFACE INTERACTIONS%PATHWAY INTERACTION DATABASE NCI-NATURE CURATED DATA%INTEGRIN FAMILY CELL SURFACE INTERACTIONS
Enrichment Score (ES)0.79291797
Normalized Enrichment Score (NES)2.026462
Nominal p-value0.0
FDR q-value0.0042256163
FWER p-Value0.054
Table: GSEA Results Summary



Fig 1: Enrichment plot: INTEGRIN FAMILY CELL SURFACE INTERACTIONS%PATHWAY INTERACTION DATABASE NCI-NATURE CURATED DATA%INTEGRIN FAMILY CELL SURFACE INTERACTIONS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ITGB69610.0780.1692Yes
2ITGA31179.5680.3338Yes
3ITGB13815.6510.4170Yes
4ITGA54784.9830.4980Yes
5ITGB57033.9370.5538Yes
6ITGAV7543.8080.6169Yes
7ITGB88273.6020.6753Yes
8ITGB48623.5070.7342Yes
9ITGB38833.4560.7929Yes
10ITGA230671.2420.6932No
11ITGA632511.1600.7031No
12ITGA1150030.5720.6158No
13ITGB762310.3180.5531No
14ITGA2B68230.2340.5244No
15ITGA471620.1870.5088No
16ITGB283080.0610.4463No
17ITGAX8954-0.0030.4105No
18ITGAE9109-0.0180.4023No
19ITGAL9790-0.0880.3660No
20ITGA110268-0.1460.3421No
21ITGA811039-0.2510.3036No
22ITGAM11070-0.2560.3064No
23ITGA713453-0.7510.1871No
24ITGAD13690-0.8220.1882No
25ITGA1014531-1.1420.1614No
26ITGA915801-1.8980.1238No
Table: GSEA details [plain text format]



Fig 2: INTEGRIN FAMILY CELL SURFACE INTERACTIONS%PATHWAY INTERACTION DATABASE NCI-NATURE CURATED DATA%INTEGRIN FAMILY CELL SURFACE INTERACTIONS: Random ES distribution   
Gene set null distribution of ES for INTEGRIN FAMILY CELL SURFACE INTERACTIONS%PATHWAY INTERACTION DATABASE NCI-NATURE CURATED DATA%INTEGRIN FAMILY CELL SURFACE INTERACTIONS